Footnotes
In the IOS app, the footnote pullup will move to the verse that you are on. It will also add any links, tags, or notes to the footnotes and not as a big box within the verses. It would be nice for the Windows app to work like the IOS app in that regard.
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Jacob Atkinson
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UserVoice is for feature suggestions and ideas for feature enhancements. Please send an email to support or visit the LDS Tech forums for bug reports. The footnotes failing to scroll when clicked is a bug, and not by design.
Behavior specific to Windows, the annotations boxes, is working as intended to allow for more immersive study.